- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 8 residues within 4Å:- Chain A: Q.86
- Chain M: Y.11, I.12, P.13, V.14, D.15, Q.16, P.72
4 PLIP interactions:4 interactions with chain M- Hydrogen bonds: M:V.14, M:D.15, M:Q.16
- Water bridges: M:Q.16
GOL.5: 8 residues within 4Å:- Chain C: Q.86
- Chain O: Y.11, I.12, P.13, V.14, D.15, Q.16, P.72
4 PLIP interactions:4 interactions with chain O- Hydrogen bonds: O:V.14, O:D.15, O:Q.16
- Water bridges: O:Q.16
GOL.8: 8 residues within 4Å:- Chain E: Q.86
- Chain I: Y.11, I.12, P.13, V.14, D.15, Q.16, P.72
4 PLIP interactions:4 interactions with chain I- Hydrogen bonds: I:V.14, I:D.15, I:Q.16
- Water bridges: I:Q.16
GOL.11: 8 residues within 4Å:- Chain G: Q.86
- Chain K: Y.11, I.12, P.13, V.14, D.15, Q.16, P.72
4 PLIP interactions:4 interactions with chain K- Hydrogen bonds: K:V.14, K:D.15, K:Q.16
- Water bridges: K:Q.16
GOL.14: 8 residues within 4Å:- Chain E: Y.11, I.12, P.13, V.14, D.15, Q.16, P.72
- Chain I: Q.86
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:V.14, E:D.15, E:Q.16
- Water bridges: E:Q.16
GOL.17: 8 residues within 4Å:- Chain G: Y.11, I.12, P.13, V.14, D.15, Q.16, P.72
- Chain K: Q.86
4 PLIP interactions:4 interactions with chain G- Hydrogen bonds: G:V.14, G:D.15, G:Q.16
- Water bridges: G:Q.16
GOL.20: 8 residues within 4Å:- Chain A: Y.11, I.12, P.13, V.14, D.15, Q.16, P.72
- Chain M: Q.86
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:V.14, A:D.15, A:Q.16
- Water bridges: A:Q.16
GOL.23: 8 residues within 4Å:- Chain C: Y.11, I.12, P.13, V.14, D.15, Q.16, P.72
- Chain O: Q.86
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:V.14, C:D.15, C:Q.16
- Water bridges: C:Q.16
- 8 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 2 residues within 4Å:- Chain A: R.129
- Chain G: K.36
Ligand excluded by PLIPCL.6: 2 residues within 4Å:- Chain C: R.129
- Chain E: K.36
Ligand excluded by PLIPCL.9: 2 residues within 4Å:- Chain A: K.36
- Chain E: R.129
Ligand excluded by PLIPCL.12: 2 residues within 4Å:- Chain C: K.36
- Chain G: R.129
Ligand excluded by PLIPCL.15: 2 residues within 4Å:- Chain I: R.129
- Chain O: K.36
Ligand excluded by PLIPCL.18: 2 residues within 4Å:- Chain K: R.129
- Chain M: K.36
Ligand excluded by PLIPCL.21: 2 residues within 4Å:- Chain I: K.36
- Chain M: R.129
Ligand excluded by PLIPCL.24: 2 residues within 4Å:- Chain K: K.36
- Chain O: R.129
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jacewicz, A. et al., Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs. Rna (2015)
- Release Date
- 2014-12-17
- Peptides
- Branchpoint-bridging protein: ACEGIKMO
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AI
AK
AM
AO
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 8 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jacewicz, A. et al., Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs. Rna (2015)
- Release Date
- 2014-12-17
- Peptides
- Branchpoint-bridging protein: ACEGIKMO
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AG
AI
AK
AM
AO
A