SMTL ID : 4was.1 (1 other biounit)

STRUCTURE OF THE ETR1P/NADP/CROTONYL-COA COMPLEX

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 24 residues within 4Å: Chain A: P.47, V.149, N.150, T.153, G.175, T.177, S.178, A.179, V.180, R.200, R.202, C.252, V.253, Y.274, G.275, G.276, M.277, S.278, F.299, W.300, V.301, K.359 Chain B: I.290 Ligands: COO.2 30 PLIP interactions: 30 interactions with chain A Hydrophobic interactions: A:V.149, A:T.153 Hydrogen bonds: A:N.150, A:T.153, A:G.175, A:T.177, A:T.177, A:T.177, A:A.179, A:V.180, A:R.200, A:C.252, A:Y.274, A:G.276, A:V.301 Water bridges: A:S.48, A:G.175, A:R.202, A:R.202, A:S.355, A:K.359, A:K.359, A:K.359, A:K.359 Salt bridges: A:R.200, A:R.202, A:K.359, A:K.359 pi-Cation interactions: A:R.200, A:R.200 NAP.3: 22 residues within 4Å: Chain A: I.290 Chain B: P.47, V.149, N.150, T.153, G.175, T.177, S.178, A.179, V.180, R.200, R.202, C.252, V.253, Y.274, G.275, M.277, F.299, W.300, V.301, K.359 Ligands: COO.4 27 PLIP interactions: 27 interactions with chain B Hydrophobic interactions: B:V.149, B:T.153 Hydrogen bonds: B:N.150, B:G.175, B:T.177, B:T.177, B:T.177, B:A.179, B:V.180, B:R.200, B:C.252, B:Y.274, B:G.276, B:V.301 Water bridges: B:S.48, B:G.175, B:R.202, B:R.202, B:K.359, B:K.359, B:K.359 Salt bridges: B:R.200, B:R.202, B:K.359, B:K.359 pi-Cation interactions: B:R.200, B:R.200

2 x COO: CROTONYL COENZYME A(Non-covalent)

COO.2: 17 residues within 4Å: Chain A: S.48, N.51, V.56, Y.57, V.149, G.275, G.276, M.277, F.279, W.300, V.301, T.302 Chain B: P.285, T.286, S.287, I.290 Ligands: NAP.1 14 PLIP interactions: 8 interactions with chain A, 6 interactions with chain B Hydrophobic interactions: A:Y.57, A:V.301, B:T.286 Hydrogen bonds: A:S.48, A:N.51, A:N.51, A:G.276, A:G.276, B:T.286, B:T.286, B:S.287, B:S.287, B:S.287 Water bridges: A:Q.54 COO.4: 13 residues within 4Å: Chain A: I.290, F.291 Chain B: P.47, I.50, N.51, Q.54, V.56, G.275, G.276, M.277, F.279, V.352 Ligands: NAP.3 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:P.47 Hydrogen bonds: B:N.51, B:N.51, B:Q.54, B:G.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rosenthal, R.G. et al., The use of ene adducts to study and engineer enoyl-thioester reductases. Nat.Chem.Biol. (2015)

Release Date

2015-03-18

Peptides

Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, mitochondrial

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