SMTL ID : 4wbq.1

Crystal structure of the exonuclease domain of QIP (QDE-2 interacting protein) solved by native-SAD phasing.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

homo-dimer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: D.14, H.121, D.126 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.14, A:H.121, H2O.1, H2O.1, H2O.1 CA.2: 3 residues within 4Å: Chain A: D.14, L.15, E.16 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.14, A:D.14, A:L.15, A:E.16, H2O.1 CA.3: 4 residues within 4Å: Chain B: D.14, L.15, E.16 Ligands: CA.4 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.14, B:L.15, B:E.16, H2O.2, H2O.2 CA.4: 4 residues within 4Å: Chain B: D.14, H.121, D.126 Ligands: CA.3 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.14, B:H.121, B:D.126, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weinert, T. et al., Fast native-SAD phasing for routine macromolecular structure determination. Nat.Methods (2015)

Release Date

2014-12-10

Peptides

QDE-2-interacting protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

QDE-2-interacting protein