SMTL ID : 4wd2.1

Crystal structure of an aromatic amino acid aminotransferase from Burkholderia cenocepacia J2315

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: D.34, Q.35, K.36, V.37, S.391, I.395 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.34, A:Q.35, A:S.391, A:S.391 Water bridges: A:N.389 GOL.2: 5 residues within 4Å: Chain A: N.38, I.41, F.45, G.387, N.392 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.38, A:N.392 Water bridges: A:N.38, A:I.41, A:N.389, A:N.389, A:S.391 GOL.3: 7 residues within 4Å: Chain A: G.101, I.103, A.104, A.273, E.277, L.280 Ligands: GOL.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.276 Water bridges: A:R.83, A:R.83, A:Q.87 GOL.4: 5 residues within 4Å: Chain A: R.83, D.84, Q.87, I.103 Ligands: GOL.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.87, A:I.103 Water bridges: A:D.84, A:R.98 GOL.5: 6 residues within 4Å: Chain B: D.34, Q.35, K.36, V.37, S.391, I.395 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.34, B:Q.35, B:S.391, B:S.391 Water bridges: B:N.389 GOL.6: 5 residues within 4Å: Chain B: N.38, I.41, F.45, G.387, N.392 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:N.38, B:N.392 Water bridges: B:N.38, B:I.41, B:N.389, B:N.389, B:S.391 GOL.7: 7 residues within 4Å: Chain B: G.101, I.103, A.104, A.273, E.277, L.280 Ligands: GOL.8 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:A.276, B:E.277 Water bridges: B:R.83, B:R.83, B:Q.87 GOL.8: 5 residues within 4Å: Chain B: R.83, D.84, Q.87, I.103 Ligands: GOL.7 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.84, B:Q.87, B:I.103 Water bridges: B:D.84, B:R.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seattle Structural Genomics Center for Infectious Disease (SSGCID), Crystal structure of an aromatic amino acid aminotransferase from Burkholderia cenocepacia J2315. to be published

Release Date

2014-10-08

Peptides

Aromatic-amino-acid transaminase TyrB: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Aromatic-amino-acid transaminase TyrB