SMTL ID : 4wf8.1

Crystal structure of NS3/4A protease in complex with Asunaprevir

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.109, T.110, C.111, C.157, A.159, H.161 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.109, A:C.111, A:C.157

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: V.5, I.6, R.23, D.37, N.39 Ligand excluded by PLIP

1 x 2R9: N-(tert-butoxycarbonyl)-3-methyl-L-valyl-(4R)-4-[(7-chloro-4-methoxyisoquinolin-1-yl)oxy]-N-{(1R,2S)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethenylcyclopropyl}-L-prolinamide(Non-covalent)

2R9.3: 25 residues within 4Å: Chain A: Q.53, T.54, F.55, V.67, Y.68, H.69, G.70, V.90, D.91, K.92, D.93, R.135, I.144, L.147, K.148, G.149, S.150, S.151, F.166, R.167, A.168, A.169, V.170, S.171, D.180 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.55, A:F.55, A:D.93, A:L.147, A:F.166, A:A.168, A:A.169, A:V.170 Hydrogen bonds: A:H.69, A:G.149, A:S.150, A:S.151, A:S.151, A:R.167, A:A.169, A:A.169 Water bridges: A:S.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Soumana, D.I. et al., Structural Analysis of Asunaprevir Resistance in HCV NS3/4A Protease. Acs Chem.Biol. (2014)

Release Date

2014-10-08

Peptides

NS3 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NS3 protein