SMTL ID : 4wqn.2 (1 other biounit)

Crystal structure of N6-methyladenosine RNA reader YTHDF2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: K.36, V.81, N.82, G.83, S.84, G.85, N.127 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.36, A:N.82, A:G.83, A:G.85, A:N.127 EDO.2: 3 residues within 4Å: Chain A: E.136, N.140, K.156 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, T. et al., Crystal structure of the YTH domain of YTHDF2 reveals mechanism for recognition of N6-methyladenosine. Cell Res. (2014)

Release Date

2014-11-19

Peptides

YTH domain-containing family protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

YTH domain-containing family protein 2

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