SMTL ID : 4x2g.1

Selection of fragments for kinase inhibitor design: decoration is key

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

monomer

Ligands

1 x 3WK: 4-[(4-aminophenyl)amino]pyrido[2,3-d]pyrimidin-5(6H)-one(Non-covalent)

3WK.1: 13 residues within 4Å: Chain A: I.13, V.21, A.32, L.62, S.82, D.83, Y.84, H.85, G.88, S.89, D.92, L.142 Ligands: TRS.3 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.13, A:A.32, A:L.62, A:L.142 Hydrogen bonds: A:H.85, A:D.92

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: K.139, R.179, S.236, D.237, P.238 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.237 Water bridges: A:K.139 Salt bridges: A:K.139, A:R.179

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 5 residues within 4Å: Chain A: K.139, N.140, L.142, D.153 Ligands: 3WK.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.139

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czodrowski, P. et al., Selection of fragments for kinase inhibitor design: decoration is key. J.Med.Chem. (2015)

Release Date

2015-08-12

Peptides

TGF-beta receptor type-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TGF-beta receptor type-1

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