SMTL ID : 4x6l.3 (3 other biounits)

Crystal structure of S. aureus TarM in complex with UDP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.19 Å

Oligo State

homo-trimer

Ligands

3 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 15 residues within 4Å: Chain A: G.16, G.17, I.324, S.325, R.326, K.331, G.356, Y.382, T.383, P.386, E.403, G.406, L.407, S.408, E.411 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.382 Hydrogen bonds: A:G.17, A:S.20, A:T.383, A:G.406, A:L.407, A:S.408, A:E.411 Salt bridges: A:R.326, A:K.331, A:K.331 UDP.2: 15 residues within 4Å: Chain B: G.16, G.17, I.324, S.325, R.326, K.331, G.356, Y.382, T.383, P.386, E.403, G.406, L.407, S.408, E.411 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:Y.382 Hydrogen bonds: B:G.17, B:S.20, B:T.383, B:G.406, B:L.407, B:S.408, B:E.411 Salt bridges: B:R.326, B:K.331, B:K.331 UDP.3: 15 residues within 4Å: Chain C: G.16, G.17, I.324, S.325, R.326, K.331, G.356, Y.382, T.383, P.386, E.403, G.406, L.407, S.408, E.411 11 PLIP interactions: 11 interactions with chain C Hydrophobic interactions: C:Y.382 Hydrogen bonds: C:G.17, C:S.20, C:T.383, C:G.406, C:L.407, C:S.408, C:E.411 Salt bridges: C:R.326, C:K.331, C:K.331

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sobhanifar, S. et al., Structure and mechanism of Staphylococcus aureus TarM, the wall teichoic acid alpha-glycosyltransferase. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-02-25

Peptides

TarM: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
C

C
C

TarM

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