SMTL ID : 4x8j.1 (1 other biounit)

Crystal Structure of murine 12F4 Fab monoclonal antibody against ADAMTS5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-oligomer

Ligands

2 x ZN: ZINC ION(Non-functional Binders)(Non-covalent)

ZN.1: 1 residues within 4Å: Ligands: 2PE.2 No protein-ligand interaction detected (PLIP) ZN.4: 2 residues within 4Å: Chain B: D.31 Ligands: 2PE.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.31

2 x 2PE: NONAETHYLENE GLYCOL(Non-covalent)

2PE.2: 6 residues within 4Å: Chain A: Y.49, Y.91 Chain B: P.101, F.102 Ligands: ZN.1, 2PE.3 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:P.101 Water bridges: B:F.102 2PE.3: 7 residues within 4Å: Chain B: F.27, D.31, A.32, W.33, Y.104 Ligands: 2PE.2, ZN.4 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Larkin, J. et al., Translational development of an ADAMTS-5 antibody for osteoarthritis disease modification. Osteoarthr. Cartil. (2015)

Release Date

2015-04-08

Peptides

12F4 FAB Light chain: A
12F4 FAB Heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

12F4 FAB Light chain

12F4 FAB Heavy chain

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