SMTL ID : 4xav.2 (3 other biounits)

Crystal structure of olfactomedin domain from gliomedin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: R.44, D.52, D.70, L.71, P.72 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.71 Water bridges: A:D.52 GOL.2: 9 residues within 4Å: Chain A: Y.96, V.148, D.149, E.150, K.151, G.152, I.153, E.173, M.243 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.149, A:E.173, A:E.173 Water bridges: A:E.173

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: N.145, N.193, A.194, L.239 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.145, A:A.194, A:A.194, A:L.239

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hill, S.E. et al., Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies. Plos One (2015)

Release Date

2015-07-15

Peptides

Gliomedin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Gliomedin

Related Entries With Identical Sequence