- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 6 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
MG.2: 1 residues within 4Å:- Ligands: ANP.1
No protein-ligand interaction detected (PLIP)MG.6: 2 residues within 4Å:- Chain A: D.93
- Chain B: R.309
No protein-ligand interaction detected (PLIP)MG.10: 1 residues within 4Å:- Ligands: ANP.9
No protein-ligand interaction detected (PLIP)MG.15: 1 residues within 4Å:- Ligands: ANP.14
No protein-ligand interaction detected (PLIP)MG.19: 2 residues within 4Å:- Chain C: D.93
- Chain D: R.309
No protein-ligand interaction detected (PLIP)MG.23: 1 residues within 4Å:- Ligands: ANP.22
No protein-ligand interaction detected (PLIP)- 4 x ARG: ARGININE(Non-covalent)
ARG.3: 13 residues within 4Å:- Chain A: Y.95, S.99, A.100, N.131, R.135, S.183, D.185, A.192, E.194, E.268, E.278, Y.280, Y.320
15 PLIP interactions:14 interactions with chain A, 1 Ligand-Ligand interactions- Hydrogen bonds: A:A.100, A:N.131, A:S.183, A:E.194, A:E.268, A:Y.280, A:Y.320, A:Y.320, R.3
- Water bridges: A:N.131, A:D.132, A:E.278
- Salt bridges: A:R.135, A:E.194, A:E.278
ARG.11: 14 residues within 4Å:- Chain B: Y.95, S.99, A.100, N.131, R.135, S.183, D.185, A.192, V.193, E.194, E.268, E.278, Y.280, Y.320
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:Y.280
- Hydrogen bonds: B:Y.95, B:Y.95, B:N.131, B:S.183, B:S.183, B:E.268
- Water bridges: B:R.103, B:N.131
- Salt bridges: B:R.135, B:E.194, B:E.278
ARG.16: 13 residues within 4Å:- Chain C: Y.95, S.99, A.100, N.131, R.135, S.183, D.185, A.192, E.194, E.268, E.278, Y.280, Y.320
15 PLIP interactions:14 interactions with chain C, 1 Ligand-Ligand interactions- Hydrogen bonds: C:A.100, C:N.131, C:S.183, C:E.194, C:E.268, C:Y.280, C:Y.320, C:Y.320, R.16
- Water bridges: C:N.131, C:D.132, C:E.278
- Salt bridges: C:R.135, C:E.194, C:E.278
ARG.24: 14 residues within 4Å:- Chain D: Y.95, S.99, A.100, N.131, R.135, S.183, D.185, A.192, V.193, E.194, E.268, E.278, Y.280, Y.320
12 PLIP interactions:12 interactions with chain D,- Hydrophobic interactions: D:Y.280
- Hydrogen bonds: D:Y.95, D:Y.95, D:N.131, D:S.183, D:S.183, D:E.268
- Water bridges: D:R.103, D:N.131
- Salt bridges: D:R.135, D:E.194, D:E.278
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 6 residues within 4Å:- Chain A: T.380, F.381, D.382, A.385
- Chain D: Q.391, L.395
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:T.380, A:D.382, A:D.382, D:Q.391
EDO.5: 4 residues within 4Å:- Chain A: E.199, H.200, L.201
- Chain B: Y.368
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:H.200, A:L.201
- Water bridges: A:W.202, A:W.202
EDO.7: 5 residues within 4Å:- Chain A: A.401, D.404
- Chain B: S.142, L.143, F.325
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.404
EDO.8: 4 residues within 4Å:- Chain A: L.143, F.325
- Chain B: A.401, D.404
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:D.404, B:D.404
EDO.12: 6 residues within 4Å:- Chain B: T.380, F.381, D.382, A.385
- Chain C: Q.391, L.395
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain C- Hydrogen bonds: B:T.380, B:D.382, B:D.382, C:Q.391
EDO.13: 4 residues within 4Å:- Chain A: Y.368
- Chain B: E.199, H.200, L.201
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:L.201
- Water bridges: B:W.202
EDO.17: 6 residues within 4Å:- Chain B: Q.391, L.395
- Chain C: T.380, F.381, D.382, A.385
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain C- Hydrogen bonds: B:Q.391, C:T.380, C:D.382, C:D.382
EDO.18: 4 residues within 4Å:- Chain C: E.199, H.200, L.201
- Chain D: Y.368
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:H.200, C:L.201
- Water bridges: C:W.202, C:W.202
EDO.20: 5 residues within 4Å:- Chain C: A.401, D.404
- Chain D: S.142, L.143, F.325
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:D.404
EDO.21: 4 residues within 4Å:- Chain C: L.143, F.325
- Chain D: A.401, D.404
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:D.404, D:D.404
EDO.25: 6 residues within 4Å:- Chain A: Q.391, L.395
- Chain D: T.380, F.381, D.382, A.385
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain A- Hydrogen bonds: D:T.380, D:D.382, D:D.382, A:Q.391
EDO.26: 4 residues within 4Å:- Chain C: Y.368
- Chain D: E.199, H.200, L.201
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:L.201
- Water bridges: D:W.202
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Abendroth, J. et al., Crystal structure of Argininosuccinate synthase from Mycobacterium thermoresistibile in complex with AMPPNP and Arginine. To Be Published
- Release Date
- 2015-01-14
- Peptides
- Argininosuccinate synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 6 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- 4 x ARG: ARGININE(Non-covalent)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Abendroth, J. et al., Crystal structure of Argininosuccinate synthase from Mycobacterium thermoresistibile in complex with AMPPNP and Arginine. To Be Published
- Release Date
- 2015-01-14
- Peptides
- Argininosuccinate synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B