- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-12-mer
- Ligands
- 14 x SO4: SULFATE ION(Non-functional Binders)
- 4 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.2: 18 residues within 4Å:- Chain B: N.138, L.139, I.140, Y.141, P.180, P.181, G.182, T.183, G.184, K.185, T.186, S.187, N.300, M.330, G.384, R.385, S.388
- Chain C: K.167
13 PLIP interactions:13 interactions with chain B- Hydrogen bonds: B:I.140, B:I.140, B:T.183, B:G.184, B:K.185, B:T.186, B:T.186, B:T.186, B:S.187, B:S.187, B:N.300, B:S.388
- Salt bridges: B:K.185
ADP.8: 16 residues within 4Å:- Chain E: N.138, L.139, I.140, Y.141, P.181, G.182, T.183, G.184, K.185, T.186, S.187, M.330, G.384, R.385, S.388
- Chain F: K.167
15 PLIP interactions:13 interactions with chain E, 2 interactions with chain F- Hydrogen bonds: E:I.140, E:I.140, E:T.183, E:G.184, E:K.185, E:T.186, E:T.186, E:T.186, E:S.187, E:S.187, E:N.300, E:S.388, F:K.167
- Salt bridges: E:K.185
- Water bridges: F:N.170
ADP.11: 18 residues within 4Å:- Chain H: N.138, L.139, I.140, Y.141, P.180, P.181, G.182, T.183, G.184, K.185, T.186, S.187, N.300, M.330, G.384, R.385, S.388
- Chain I: K.167
13 PLIP interactions:13 interactions with chain H- Hydrogen bonds: H:I.140, H:I.140, H:T.183, H:G.184, H:K.185, H:T.186, H:T.186, H:T.186, H:S.187, H:S.187, H:N.300, H:S.388
- Salt bridges: H:K.185
ADP.17: 16 residues within 4Å:- Chain K: N.138, L.139, I.140, Y.141, P.181, G.182, T.183, G.184, K.185, T.186, S.187, M.330, G.384, R.385, S.388
- Chain L: K.167
16 PLIP interactions:14 interactions with chain K, 2 interactions with chain L- Hydrogen bonds: K:I.140, K:I.140, K:T.183, K:T.183, K:G.184, K:K.185, K:T.186, K:T.186, K:T.186, K:S.187, K:S.187, K:N.300, K:S.388, L:K.167
- Salt bridges: K:K.185
- Water bridges: L:N.170
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ye, Q. et al., TRIP13 is a protein-remodeling AAA+ ATPase that catalyzes MAD2 conformation switching. Elife (2015)
- Release Date
- 2015-05-06
- Peptides
- Putative pachytene checkpoint protein 2: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
AH
BI
CJ
DK
EL
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-12-mer
- Ligands
- 14 x SO4: SULFATE ION(Non-functional Binders)
- 4 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ye, Q. et al., TRIP13 is a protein-remodeling AAA+ ATPase that catalyzes MAD2 conformation switching. Elife (2015)
- Release Date
- 2015-05-06
- Peptides
- Putative pachytene checkpoint protein 2: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
AH
BI
CJ
DK
EL
F