SMTL ID : 4xh2.1 (5 other biounits)

Crystal structure of human paxillin LD4 motif in complex with Fab fragment

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain B: T.6, Q.7, F.101, G.102, Q.103 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.7, B:Q.7, B:F.101, B:Q.103 Water bridges: B:G.104 GOL.2: 6 residues within 4Å: Chain A: V.170, H.171 Chain B: T.167, E.168, Q.169, D.170 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:V.170, B:D.170, B:D.170 Water bridges: B:S.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocula-Lugowska, M. et al., Engineering Synthetic Antibody Inhibitors Specific for LD2 or LD4 Motifs of Paxillin. J.Mol.Biol. (2015)

Release Date

2015-07-01

Peptides

Fab Heavy Chain: A
Fab Light Chain: B
paxillin LD4: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
a

Fab Heavy Chain

Fab Light Chain

paxillin LD4

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