SMTL ID : 4xhz.1

Crystal Structure of Human Protocadherin-15 EC8-10

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: N.106, Y.108, D.138, D.140, A.146, D.196 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:Y.108, A:D.138, A:D.140, A:A.146, A:D.196 CA.2: 5 residues within 4Å: Chain A: E.16, E.69, D.104, M.105, D.107 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.16, A:E.69, A:D.104, A:M.105, A:D.107 CA.3: 4 residues within 4Å: Chain A: E.16, D.67, E.69, D.107 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.16, A:D.67, A:E.69, A:D.107, H2O.3

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: V.153, E.166, V.167, R.177 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Araya-Secchi, R. et al., An elastic element in the protocadherin-15 tip link of the inner ear. Nat Commun (2016)

Release Date

2016-09-21

Peptides

Protocadherin-15: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protocadherin-15