SMTL ID : 4xul.1

Crystal structure of M. chilensis Mg662 protein complexed with GTP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.63, D.65, D.210 Ligands: MG.2, GTP.4 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.63, A:D.65, A:D.210, H2O.1, H2O.2 MG.2: 6 residues within 4Å: Chain A: S.53, T.62, D.63, D.65 Ligands: MG.1, GTP.4 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.63, A:D.65, H2O.5

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: I.90, Q.91, D.93, I.96 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.91

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.4: 16 residues within 4Å: Chain A: G.52, S.53, T.62, D.63, D.65, Q.231, L.234, A.235, E.240, Y.243, K.274, V.278, D.281, Y.346 Ligands: MG.1, MG.2 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:S.53, A:S.53, A:S.53, A:Q.231, A:E.240, A:D.281, A:D.281, A:Y.346 Water bridges: A:F.54, A:R.56, A:R.56, A:T.62, A:D.63, A:D.210, A:S.238, A:E.240, A:Y.346 Salt bridges: A:E.240, A:K.274 pi-Stacking: A:Y.243, A:Y.243 pi-Cation interactions: A:Y.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lartigue, A. et al., Crystal structure of M. chilensis Mg662 protein complexed with GTP. To Be Published

Release Date

2016-02-03

Peptides

mg662: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

mg662

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