SMTL ID : 4y7v.1

Structural analysis of MurU

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: M.1, L.117, Q.118, A.119, P.120, L.121 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.117, A:L.121, A:L.121

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: E.84, T.85, K.180, L.181 Ligands: 491.3 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.84, A:T.85, A:T.85, A:G.86, A:L.181 Water bridges: A:A.182 Salt bridges: A:K.180

1 x 491: 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-1-O-phosphono-alpha-D-glucopyranose(Non-covalent)

491.3: 14 residues within 4Å: Chain A: L.6, T.85, N.105, D.140, F.141, T.159, F.160, G.162, L.181, A.182, R.186, W.203, D.205 Ligands: SO4.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:T.85, A:F.141, A:A.182 Hydrogen bonds: A:N.105, A:D.205 Water bridges: A:R.13, A:D.140

1 x 2PN: IMIDODIPHOSPHORIC ACID(Non-covalent)

2PN.4: 6 residues within 4Å: Chain A: G.9, K.10, G.11, E.12, R.13, K.23 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:K.10, A:G.11, A:E.12, A:R.13, A:R.13, A:R.13, A:K.23, A:K.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Renner-Schneck, M. et al., Crystal Structure of the N-Acetylmuramic Acid alpha-1-Phosphate (MurNAc-alpha 1-P) Uridylyltransferase MurU, a Minimal Sugar Nucleotidyltransferase and Potential Drug Target Enzyme in Gram-negative Pathogens. J.Biol.Chem. (2015)

Release Date

2015-03-18

Peptides

Nucleotidyl transferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleotidyl transferase

Related Entries With Identical Sequence