SMTL ID : 4ya8.3 (3 other biounits)

structure of plasmepsin II from Plasmodium Falciparum complexed with inhibitor PG394

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

monomer

Ligands

1 x 49W: N'-[(2S,3S)-3-hydroxy-1-phenyl-4-{[2-(pyridin-2-yl)propan-2-yl]amino}butan-2-yl]-N,N-dipropyl-5-(pyridin-1(2H)-yl)benzene-1,3-dicarboxamide(Non-covalent)

49W.1: 19 residues within 4Å: Chain A: I.32, D.34, G.36, Y.77, V.78, S.79, F.111, T.114, I.123, Y.192, D.214, G.216, T.217, S.218, I.290, L.292, F.294, I.300 Ligands: GOL.3 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.32, A:V.78, A:F.111, A:T.114, A:I.123, A:I.290, A:F.294, A:I.300 Hydrogen bonds: A:D.34, A:V.78, A:S.79, A:G.216, A:T.217, A:T.217, A:S.218

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 1 residues within 4Å: Chain A: D.279 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.279 GOL.3: 6 residues within 4Å: Chain A: G.36, M.75, N.76, Y.77, I.133 Ligands: 49W.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Recacha, R. et al., Structures of plasmepsin II from Plasmodium falciparum in complex with two hydroxyethylamine-based inhibitors. Acta Crystallogr.,Sect.F (2015)

Release Date

2015-12-09

Peptides

Plasmepsin-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Plasmepsin-2

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