SMTL ID : 4yde.1

CRYSTAL STRUCTURE OF CANDIDA ALBICANS PROTEIN FARNESYLTRANSFERASE BINARY COMPLEX WITH THE ISOPRENOID FARNESYLDIPHOSPHATE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: Q.270, Q.278 Chain B: I.116 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.270, A:Q.278 EDO.4: 2 residues within 4Å: Chain B: G.186, Y.187 No protein-ligand interaction detected (PLIP)

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain B: D.430, C.432, H.496 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.430, B:D.430, B:C.432, B:H.496, H2O.6

1 x 4C7: (3R,7S)-3,7,11-trimethyldodecyl trihydrogen diphosphate(Non-covalent)

4C7.3: 13 residues within 4Å: Chain A: H.168 Chain B: W.196, R.311, H.368, G.370, Y.371, C.374, R.424, K.427, Y.433, W.436, Y.495, Y.499 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:R.311, B:Y.371, B:W.436 Hydrogen bonds: B:Y.433 Water bridges: B:G.423, B:R.424, B:R.424, B:R.424, B:D.430, B:Y.433, B:K.487 Salt bridges: B:H.368, B:H.368, B:R.424, B:R.424, B:K.427

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, S. et al., CRYSTAL STRUCTURE OF CANDIDA ALBICANS PROTEIN FARNESYLTRANSFERASE BINARY COMPLEX WITH THE ISOPRENOID FARNESYLDIPHOSPHATE. To Be Published

Release Date

2016-07-06

Peptides

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha: A
Protein farnesyltransferase/geranylgeranyltransferase type-1 Subunit beta: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

Protein farnesyltransferase/geranylgeranyltransferase type-1 Subunit beta

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