SMTL ID : 4yef.1 (6 other biounits)

beta1 carbohydrate binding module (CBM) of AMP-activated protein kinase (AMPK) in complex with glucosyl-beta-cyclododextrin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

1 x GLC- GLC- GLC- GLC- GLC- GLC- GLC: Cycloheptakis-(1-4)-(alpha-D-glucopyranose)(Non-covalent)

GLC-GLC-GLC-GLC-GLC-GLC-GLC.1: 8 residues within 4Å: Chain A: W.33, K.59, W.66, S.77, Q.78, L.79, T.81, N.83 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.59, A:K.59, A:T.81 Water bridges: A:K.59

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: S.29, F.30, E.55, H.56 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.29, A:H.56 Water bridges: A:E.55, A:E.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mobbs, J.I. et al., Determinants of oligosaccharide specificity of the carbohydrate-binding modules of AMP-activated protein kinase. Biochem.J. (2015)

Release Date

2015-06-24

Peptides

5'-AMP-activated protein kinase subunit beta-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

5'-AMP-activated protein kinase subunit beta-1

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