SMTL ID : 4yl5.1

Structure of a putative phosphomethylpyrimidine kinase from Acinetobacter baumannii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: G.86, M.87, L.88, G.89, V.114, L.123, L.129, F.133 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.88, A:G.89, A:L.123 EDO.2: 5 residues within 4Å: Chain A: D.20, G.26, Q.51, M.87, L.123 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.26, A:Q.51, A:Q.51 Water bridges: A:G.18, A:G.18 EDO.3: 8 residues within 4Å: Chain B: G.86, M.87, L.88, G.89, V.114, L.123, L.129, F.133 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:L.88, B:G.89, B:L.123 EDO.4: 5 residues within 4Å: Chain B: D.20, G.26, Q.51, M.87, L.123 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.26, B:Q.51, B:Q.51 Water bridges: B:G.18, B:G.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., Structure of a putative phosphomethylpyrimidine kinase from Acinetobacter baumannii. to be published

Release Date

2015-04-01

Peptides

Putative phosphomethylpyrimidine kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Putative phosphomethylpyrimidine kinase

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