SMTL ID : 4yn2.2 (1 other biounit)

THE ATOMIC STRUCTURE OF WISEANA SPP ENTOMOPOXVIRUS (WSEPV) FUSOLIN SPINDLES

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 9 residues within 4Å: Chain A: Y.76, W.77, D.78, Y.146, E.148, Y.150, L.170, N.173, L.215 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.215 Hydrogen bonds: A:Y.76 Water bridges: A:W.77 NAG-NAG-BMA.5: 9 residues within 4Å: Chain B: Y.76, W.77, D.78, Y.146, E.148, Y.150, L.170, N.173, L.215 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:L.215 Hydrogen bonds: B:Y.76 Water bridges: B:W.77

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: H.1, A.140, H.142, R.214, F.222 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.1, A:H.142 ZN.6: 5 residues within 4Å: Chain B: H.1, A.140, H.142, R.214, F.222 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.1, B:H.142

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 9 residues within 4Å: Chain A: E.133, V.176, P.177, D.179, R.194, F.195, T.196 Chain B: R.282, F.283 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.133, A:E.133, A:T.196, A:T.196 EDO.4: 10 residues within 4Å: Chain A: P.236, D.240, I.241, I.242, V.243 Chain B: A.35, Q.38, Y.39, D.42, I.111 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:D.240, A:I.242, A:I.242, B:D.42 EDO.7: 9 residues within 4Å: Chain A: R.282, F.283 Chain B: E.133, V.176, P.177, D.179, R.194, F.195, T.196 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.133, B:T.196, B:T.196 EDO.8: 10 residues within 4Å: Chain A: A.35, Q.38, Y.39, D.42, I.111 Chain B: P.236, D.240, I.241, I.242, V.243 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.240, B:I.242, B:I.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chiu, E. et al., Structural basis for the enhancement of virulence by viral spindles and their in vivo crystallization. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-04-08

Peptides

FUSOLIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

FUSOLIN

Related Entries With Identical Sequence