SMTL ID : 4yyu.1

Ficin C crystal form I

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.18 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: L.1 2 PLIP interactions: 2 interactions with chain A Water bridges: A:L.1, A:L.1 SO4.2: 3 residues within 4Å: Chain A: G.20, R.21, A.93 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.21 Salt bridges: A:R.21 SO4.3: 2 residues within 4Å: Chain A: N.119, P.203 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.119 Water bridges: A:R.118 SO4.4: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain A Water bridges: A:N.199 SO4.5: 2 residues within 4Å: Chain A: N.62 Ligands: MES.7 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.62

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.6: 6 residues within 4Å: Chain A: E.44, L.45, P.46, S.47, S.85, V.107 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.45, A:S.47 Salt bridges: A:E.44 MES.7: 7 residues within 4Å: Chain A: D.55, C.56, A.57, T.58, N.62, K.95 Ligands: SO4.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.95 Water bridges: A:T.58, A:N.62, A:N.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baldacci-Cresp, F. et al., Crystal structure of four variants of the protease Ficin from the common fig. To Be Published

Release Date

2016-04-13

Peptides

Ficin isoform C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ficin isoform C

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