SMTL ID : 4z2c.1

Quinolone(Moxifloxacin)-DNA cleavage complex of gyrase from S. pneumoniae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.19 Å

Oligo State

hetero-2-2-mer

Ligands

2 x MFX: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid(Non-covalent)

MFX.1: 9 residues within 4Å: Chain B: R.77, G.78, E.96 Chain C: S.81 Chain F: G.1 Chain G: C.4, A.5 Chain H: T.15 Ligands: MG.4 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:E.96 MFX.2: 9 residues within 4Å: Chain A: S.81 Chain D: R.77, G.78, E.96 Chain E: T.15 Chain F: C.4, A.5 Chain G: G.1 Ligands: MG.3 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:R.77

2 x MG: MAGNESIUM ION(Non-functional Binders)

MG.3: 1 residues within 4Å: Ligands: MFX.2 1 PLIP interactions: 1 Ligand-Ligand interactions Metal complexes: MFX.2 MG.4: 2 residues within 4Å: Chain H: T.15 Ligands: MFX.1 1 PLIP interactions: 1 Ligand-Ligand interactions Metal complexes: MFX.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laponogov, I. et al., Structural studies of the drug-stabilized cleavage complexes of topoisomerase IV and gyrase from Streptococcus pneumoniae. To Be Published

Release Date

2016-09-14

Peptides

DNA gyrase subunit A: AC
DNA gyrase subunit B: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

B
C

D
D

DNA gyrase subunit A

DNA gyrase subunit B

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