- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 8 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 4 x MTE: PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER(Non-covalent)
MTE.2: 19 residues within 4Å:- Chain A: R.77, M.94, M.95, G.96, S.182, S.183, S.248, K.321, C.322, Q.459, D.528, D.529, Q.533, C.534, A.535
- Ligands: MTE.3, W.4, MG.5, UNL.6
18 PLIP interactions:18 interactions with chain A- Hydrogen bonds: A:R.77, A:R.77, A:G.96, A:S.182, A:S.183, A:S.248, A:Q.459, A:Q.533, A:A.535
- Water bridges: A:M.94, A:R.181, A:R.181, A:S.183, A:H.525, A:D.529
- Salt bridges: A:R.77, A:K.321, A:D.529
MTE.3: 23 residues within 4Å:- Chain A: S.93, M.94, S.176, E.178, S.183, A.184, S.185, R.186, K.321, C.322, F.323, T.324, L.351, D.352, G.353, F.354, K.454, T.458, Q.459
- Ligands: MTE.2, W.4, MG.5, UNL.6
20 PLIP interactions:20 interactions with chain A- Hydrogen bonds: A:M.94, A:S.176, A:S.183, A:S.185, A:S.185, A:R.186, A:L.351, A:D.352, A:D.352, A:G.353, A:F.354, A:Q.459, A:Q.459
- Water bridges: A:S.183, A:S.185, A:M.319, A:K.321, A:T.347
- Salt bridges: A:E.178, A:K.454
MTE.11: 19 residues within 4Å:- Chain B: R.77, M.94, M.95, G.96, S.182, S.183, S.248, K.321, C.322, Q.459, D.528, D.529, Q.533, C.534, A.535
- Ligands: MTE.12, W.13, UNL.14, MG.15
14 PLIP interactions:14 interactions with chain B- Hydrogen bonds: B:R.77, B:R.77, B:G.96, B:S.182, B:S.183, B:S.248, B:Q.459, B:Q.533, B:A.535
- Water bridges: B:R.181, B:R.181
- Salt bridges: B:R.77, B:K.321, B:D.529
MTE.12: 23 residues within 4Å:- Chain B: S.93, M.94, S.176, E.178, S.183, A.184, S.185, R.186, K.321, C.322, F.323, T.324, L.351, D.352, G.353, F.354, K.454, T.458, Q.459
- Ligands: MTE.11, W.13, UNL.14, MG.15
15 PLIP interactions:15 interactions with chain B- Hydrogen bonds: B:M.94, B:M.94, B:S.176, B:S.183, B:S.185, B:S.185, B:R.186, B:L.351, B:D.352, B:G.353, B:F.354, B:Q.459
- Water bridges: B:S.185
- Salt bridges: B:E.178, B:K.454
- 2 x W: TUNGSTEN ION(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.5: 5 residues within 4Å:- Chain A: M.94, S.183, S.185
- Ligands: MTE.2, MTE.3
5 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions, 1 Ligand-Ligand interactions- Metal complexes: A:M.94, A:S.183, H2O.2, H2O.2, MTE.3
MG.15: 5 residues within 4Å:- Chain B: M.94, S.183, S.185
- Ligands: MTE.11, MTE.12
5 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions, 1 Ligand-Ligand interactions- Metal complexes: B:M.94, B:S.183, H2O.11, H2O.13, MTE.12
- 2 x UNL: UNKNOWN LIGAND
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
PGE.7: 3 residues within 4Å:- Chain A: T.271, R.273, Y.333
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.273
PGE.8: 10 residues within 4Å:- Chain A: V.239, M.240, W.259, P.465, Q.466, A.467, P.468, Y.469, F.494
- Ligands: 4KX.9
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:M.240
- Water bridges: A:Q.466
- 2 x 4KX: 1,5 Dienoyl-CoA(Non-covalent)
4KX.9: 22 residues within 4Å:- Chain A: P.249, E.251, W.259, H.260, N.263, F.264, R.272, F.323, L.436, L.438, S.439, M.440, Y.445, T.458, E.461, Q.466, P.499, R.500, S.504, M.505
- Ligands: UNL.6, PGE.8
22 PLIP interactions:22 interactions with chain A- Hydrophobic interactions: A:P.249, A:F.264, A:F.323, A:L.438, A:Y.445, A:T.458
- Hydrogen bonds: A:R.272, A:S.439, A:S.439, A:M.440, A:Q.466, A:Q.466, A:Q.466, A:Q.466, A:R.500, A:R.500, A:S.504, A:S.504
- Water bridges: A:N.442, A:G.501
- pi-Cation interactions: A:R.500, A:R.500
4KX.16: 21 residues within 4Å:- Chain B: P.249, E.251, W.259, H.260, N.263, F.264, R.272, F.323, L.436, L.438, S.439, M.440, N.442, Y.445, T.458, E.461, Q.466, P.499, R.500, S.504, M.505
20 PLIP interactions:20 interactions with chain B- Hydrophobic interactions: B:P.249, B:W.259, B:F.264, B:F.323, B:Y.445, B:T.458
- Hydrogen bonds: B:R.272, B:S.439, B:S.439, B:M.440, B:Y.449, B:Q.466, B:Q.466, B:Q.466, B:R.500, B:R.500, B:S.504, B:S.504
- pi-Cation interactions: B:R.500, B:R.500
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Weinert, T. et al., Structural basis of enzymatic benzene ring reduction. Nat.Chem.Biol. (2015)
- Release Date
- 2015-06-24
- Peptides
- Benzoyl-CoA reductase, putative: AB
Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein: CD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
ED
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 8 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 4 x MTE: PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER(Non-covalent)
- 2 x W: TUNGSTEN ION(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x UNL: UNKNOWN LIGAND
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 2 x 4KX: 1,5 Dienoyl-CoA(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Weinert, T. et al., Structural basis of enzymatic benzene ring reduction. Nat.Chem.Biol. (2015)
- Release Date
- 2015-06-24
- Peptides
- Benzoyl-CoA reductase, putative: AB
Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein: CD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
ED
F