SMTL ID : 4z61.1 (1 other biounit)

The plant peptide hormone receptor complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-1-1-mer

Ligands

1 x TYS- ILE- TYS- THR- GLN: PTR-ILE-PTR-THR-GLN(Non-covalent)

TYS-ILE-TYS-THR-GLN.1: 27 residues within 4Å: Chain A: R.287, A.311, S.312, N.333, A.335, K.336, S.357, S.359, V.383, T.385, L.386, I.408, A.410, S.411, L.430, D.432, S.434, W.435, P.491, F.492, F.493, K.494, K.495, G.502, F.511 Ligands: NAG.5, NAG.8 34 PLIP interactions: 34 interactions with chain A Hydrophobic interactions: A:V.383, A:T.385, A:I.408, A:A.410, A:L.430, A:F.492, A:F.493, A:F.493, A:K.495, A:F.511, A:F.511 Hydrogen bonds: A:S.312, A:N.333, A:K.336, A:S.357, A:S.359, A:S.359, A:T.385, A:S.411, A:S.411, A:D.432, A:F.493, A:F.493, A:K.495, A:G.502 Water bridges: A:S.434, A:S.434, A:P.491, A:K.494 Salt bridges: A:R.287, A:K.495, A:K.495 pi-Stacking: A:W.435, A:W.435

10 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 5 residues within 4Å: Chain A: G.71, N.93, T.95, V.115, D.117 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.115, A:D.117 Hydrogen bonds: A:G.71, A:N.93, A:D.117, A:D.117 NAG.3: 3 residues within 4Å: Chain A: N.156, G.178, N.181 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.156, A:N.181 NAG.4: 3 residues within 4Å: Chain A: S.183, S.184, N.208 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.208 NAG.5: 4 residues within 4Å: Chain A: S.264, R.287, N.288 Ligands: TYS-ILE-TYS-THR-GLN.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.264, A:R.287, A:R.287, A:N.288 NAG.6: 5 residues within 4Å: Chain A: N.277, Y.296, N.298, S.300, A.301 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.296, A:N.298 NAG.7: 6 residues within 4Å: Chain A: N.255, W.258, R.279, S.280, S.282, N.304 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.282 NAG.8: 7 residues within 4Å: Chain A: K.336, K.338, N.360, L.386, K.495 Ligands: TYS-ILE-TYS-THR-GLN.1, TYS-ILE-TYS-THR-GLN.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.386 Hydrogen bonds: A:K.338, A:N.360 NAG.9: 3 residues within 4Å: Chain A: W.435, N.459, Y.519 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.519 Hydrogen bonds: A:W.435 NAG.10: 2 residues within 4Å: Chain A: N.609, A.623 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.609 NAG.11: 4 residues within 4Å: Chain B: M.162, T.165, N.166, N.187 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.165, B:T.165, B:N.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, J. et al., Allosteric receptor activation by the plant peptide hormone phytosulfokine. Nature (2015)

Release Date

2016-03-02

Peptides

Phytosulfokine receptor 1: A
Somatic embryogenesis receptor kinase 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Phytosulfokine receptor 1

Somatic embryogenesis receptor kinase 2

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