SMTL ID : 4z9n.3 (2 other biounits)

ABC transporter / periplasmic binding protein from Brucella ovis with glutathione bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

2 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 19 residues within 4Å: Chain A: N.26, T.27, L.68, N.69, A.70, R.73, R.87, N.88, T.89, T.90, R.95, Q.138, T.141, T.142, T.143, I.166, T.183, D.184, S.187 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:N.26, A:T.27, A:T.27, A:A.70, A:R.87, A:R.87, A:N.88, A:T.90, A:T.90, A:Q.138, A:Q.138, A:T.142, A:T.183, A:T.183 Water bridges: A:I.166, A:I.166, A:D.184 Salt bridges: A:R.73, A:R.87, A:R.95 GSH.5: 19 residues within 4Å: Chain B: N.26, T.27, L.68, N.69, A.70, R.73, R.87, N.88, T.89, T.90, R.95, Q.138, T.141, T.142, T.143, I.166, T.183, D.184, S.187 21 PLIP interactions: 21 interactions with chain B Hydrogen bonds: B:N.26, B:A.70, B:R.87, B:R.87, B:N.88, B:N.88, B:T.90, B:T.90, B:T.90, B:Q.138, B:Q.138, B:Q.138, B:T.142, B:T.183, B:T.183, B:E.211 Water bridges: B:I.166, B:I.166 Salt bridges: B:R.73, B:R.87, B:R.95

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 5 residues within 4Å: Chain A: D.96, L.101, D.102, Q.219 Chain B: D.226 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:D.96, A:D.96, A:D.102 Water bridges: B:R.229 NA.4: 5 residues within 4Å: Chain A: D.226 Chain B: D.96, L.101, D.102, Q.219 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:D.102 Water bridges: A:R.229

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: S.94, R.95, G.140, T.141, T.142, L.145 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.94, A:S.94, A:R.95, A:G.140 EDO.6: 5 residues within 4Å: Chain B: R.95, G.140, T.141, T.142, L.145 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.95, B:G.140 Water bridges: B:S.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seattle Structural Genomics Center for Infectious Disease (SSGCID), ABC transporter / periplasmic binding protein from Brucella ovis with glutathione bound. To Be Published

Release Date

2015-06-17

Peptides

Amino acid ABC transporter, periplasmic amino acid-binding protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
F

Amino acid ABC transporter, periplasmic amino acid-binding protein

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