SMTL ID : 4zam.1

Crystal structure of SHV-1 beta-lactamase bound to avibactam

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

monomer

Ligands

2 x MA4: CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE(Non-covalent)

MA4.1: 14 residues within 4Å: Chain A: I.196, V.199, L.200, P.201, I.206, I.220, A.222, V.234, I.236, I.252, A.253, A.257, I.260, E.261 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.196, A:V.199, A:L.200, A:I.206, A:I.220, A:A.222, A:V.234, A:I.236, A:I.252 Hydrogen bonds: A:E.261, A:E.261 MA4.2: 5 residues within 4Å: Chain A: L.195, T.210, R.218, N.249, I.252 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.195, A:T.210, A:I.252

1 x NXL: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide(Covalent)

NXL.3: 14 residues within 4Å: Chain A: M.44, S.45, K.48, Y.80, S.105, N.107, E.141, N.145, V.191, K.209, T.210, G.211, A.212, R.218 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.45, A:S.105, A:S.105, A:N.107, A:N.145, A:T.210, A:A.212, A:A.212 Water bridges: A:T.210, A:R.218, A:R.218 Salt bridges: A:K.209, A:R.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Krishnan, N.P. et al., Inhibition of Klebsiella beta-Lactamases (SHV-1 and KPC-2) by Avibactam: A Structural Study. Plos One (2015)

Release Date

2016-01-27

Peptides

Beta-lactamase SHV-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase SHV-1

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