SMTL ID : 4zb6.1 (1 other biounit)

Crystal structure of glutathione transferase URE2P4 from Phanerochaete chrysosporium in complex with oxidized glutathione.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x GDS: OXIDIZED GLUTATHIONE DISULFIDE(Non-covalent)

GDS.1: 20 residues within 4Å: Chain A: H.13, G.16, P.17, N.18, H.45, K.46, R.58, V.59, P.60, E.74, S.75, G.116, P.117, G.120, W.124, W.176 Chain B: S.113, Y.118, R.139 Ligands: NA.2 25 PLIP interactions: 19 interactions with chain A, 6 interactions with chain B Hydrophobic interactions: A:W.124, A:W.124 Hydrogen bonds: A:N.18, A:R.58, A:V.59, A:V.59, A:E.74, A:S.75, B:S.113, B:Y.118 Water bridges: A:K.21, A:K.46, A:K.46, A:V.59, A:E.74, A:N.76, A:Q.121, B:R.139, B:E.143, B:E.143 Salt bridges: A:K.21, A:H.45, A:K.46, A:R.58, B:R.139 GDS.3: 19 residues within 4Å: Chain A: S.113, Y.118, R.139 Chain B: H.13, P.17, N.18, H.45, K.46, R.58, V.59, P.60, E.74, S.75, G.116, P.117, G.120, W.124, W.176 Ligands: NA.4 24 PLIP interactions: 19 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:N.18, B:R.58, B:V.59, B:V.59, B:E.74, B:S.75, A:S.113 Water bridges: B:K.21, B:K.21, B:K.46, B:K.46, B:R.58, B:R.58, B:E.74, B:N.76, B:Q.121, A:S.113, A:R.139, A:E.143 Salt bridges: B:K.21, B:H.45, B:K.46, B:R.58, A:R.139

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 7 residues within 4Å: Chain A: H.13, G.16, P.17, N.18, G.19, V.59 Ligands: GDS.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.13, A:G.16, A:N.18, A:N.18, A:G.19 Water bridges: A:H.13 NA.4: 7 residues within 4Å: Chain B: H.13, G.16, P.17, N.18, G.19, V.59 Ligands: GDS.3 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.18, B:N.18, B:G.19, B:V.59 Water bridges: B:G.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roret, T. et al., Evolutionary divergence of Ure2pA glutathione transferases in wood degrading fungi. Fungal Genet. Biol. (2015)

Release Date

2015-09-30

Peptides

PcUre2p4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PcUre2p4

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