SMTL ID : 4zbe.1

Crystal structure of KPC-2 beta-lactamase complexed with avibactam

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 4 residues within 4Å: Chain A: V.182, K.186, A.204, W.225 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.225, A:W.225 Water bridges: A:K.186, A:A.204 Salt bridges: A:K.186, A:K.186

1 x NXL: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide(Covalent)

NXL.2: 14 residues within 4Å: Chain A: C.43, S.44, K.47, W.79, S.104, N.106, E.140, L.141, N.144, T.190, K.208, T.209, G.210, T.211 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:S.44, A:S.104, A:S.104, A:N.106, A:N.144, A:T.190, A:T.209, A:T.211 Water bridges: A:K.47, A:K.47, A:T.211, A:T.211, A:T.211, A:T.211 Salt bridges: A:K.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Krishnan, N.P. et al., Inhibition of Klebsiella beta-Lactamases (SHV-1 and KPC-2) by Avibactam: A Structural Study. Plos One (2015)

Release Date

2016-01-27

Peptides

Carbapenem-hydrolyzing beta-lactamase KPC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbapenem-hydrolyzing beta-lactamase KPC

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