SMTL ID : 4zei.1

PBP AccA from A. tumefaciens C58 in complex with L-arabinose-2-phosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x LAO: 2-O-phosphono-alpha-L-arabinopyranose(Non-covalent)

LAO.1: 14 residues within 4Å: Chain A: I.24, S.25, N.26, Y.117, W.150, N.256, Y.347, Y.348, W.390, S.391, N.392, G.393, E.406, E.482 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.26, A:N.26, A:Y.117, A:N.256, A:Y.347, A:Y.348, A:Y.348, A:Y.348, A:W.390, A:S.391, A:G.393

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 9 residues within 4Å: Chain A: Y.141, L.142, V.432, T.433, V.434, L.435, P.436, N.437, R.441 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.141, A:T.433, A:N.437 EDO.3: 2 residues within 4Å: Chain A: R.4, D.195 No protein-ligand interaction detected (PLIP) EDO.4: 2 residues within 4Å: Chain A: K.439, F.442 No protein-ligand interaction detected (PLIP) EDO.5: 9 residues within 4Å: Chain A: A.279, R.284, M.318, F.452, E.453, A.456, A.458, V.459, I.460 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.284, A:I.460 EDO.6: 6 residues within 4Å: Chain A: G.13, L.14, I.211, M.344, Y.347, P.376 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.14 Water bridges: A:Y.347

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

El Sahili, A. et al., A Pyranose-2-Phosphate Motif Is Responsible for Both Antibiotic Import and Quorum-Sensing Regulation in Agrobacterium tumefaciens. Plos Pathog. (2015)

Release Date

2015-08-19

Peptides

ABC transporter, substrate binding protein (Agrocinopines A and B): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ABC transporter, substrate binding protein (Agrocinopines A and B)

Related Entries With Identical Sequence