SMTL ID : 4zg8.2 (1 other biounit)

Crystal structure of Endoglucanase from Perinereis brevicirris

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) NA.3: 2 residues within 4Å: Chain A: D.168, Y.171 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.168 Water bridges: A:R.95, A:R.95

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: A.208, D.211, E.212, D.248 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:A.208, A:D.211, A:E.212, H2O.6, H2O.11

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: L.318, T.319, S.320, Q.321 Ligand excluded by PLIP

2 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.5: 3 residues within 4Å: Chain A: N.397, D.399, D.402 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.397, A:D.402 Water bridges: A:D.399 Salt bridges: A:D.402 BTB.6: 5 residues within 4Å: Chain A: H.122, F.203, W.296, H.354, Y.403 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.122, A:H.354 Water bridges: A:R.356, A:R.356

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fewings, R.S., Biophysical and structural characterisation of the endoglucanase from Perinereis brevicirris. To Be Published

Release Date

2016-06-29

Peptides

Endoglucanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Endoglucanase

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