SMTL ID : 4zgs.1 (1 other biounit)

Identification of the pyruvate reductase of Chlamydomonas reinhardtii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 22 residues within 4Å: Chain A: Y.134, V.184, T.186, G.187, A.188, I.189, Y.207, D.208, H.238, C.239, P.240, L.242, S.244, T.245, V.266, S.267, R.268, D.292, H.335, T.336, A.337, F.338 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.134 Hydrogen bonds: A:G.187, A:A.188, A:I.189, A:S.244, A:S.244, A:R.268, A:D.292, A:D.292, A:F.338 NAD.2: 24 residues within 4Å: Chain B: Y.134, V.184, T.186, G.187, A.188, I.189, Y.207, D.208, I.209, H.238, C.239, P.240, L.241, L.242, S.244, T.245, V.266, S.267, R.268, D.292, H.335, T.336, A.337, F.338 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:Y.134 Hydrogen bonds: B:G.187, B:A.188, B:I.189, B:G.190, B:S.244, B:S.244, B:D.292, B:F.338 NAD.3: 24 residues within 4Å: Chain C: Y.134, T.186, G.187, A.188, I.189, Y.207, D.208, I.209, H.238, C.239, P.240, L.241, L.242, S.244, T.245, V.266, S.267, R.268, D.292, V.293, H.335, T.336, A.337, F.338 12 PLIP interactions: 12 interactions with chain C Hydrophobic interactions: C:Y.134 Hydrogen bonds: C:G.187, C:G.187, C:A.188, C:I.189, C:G.190, C:Y.207, C:C.239, C:S.244, C:S.244, C:D.292, C:F.338 NAD.4: 25 residues within 4Å: Chain D: Y.134, V.184, G.185, T.186, G.187, A.188, I.189, G.190, Y.207, D.208, I.209, H.238, C.239, P.240, S.244, T.245, V.266, S.267, R.268, D.292, V.293, H.335, T.336, A.337, F.338 11 PLIP interactions: 11 interactions with chain D Hydrophobic interactions: D:Y.134 Hydrogen bonds: D:G.187, D:A.188, D:I.189, D:G.190, D:C.239, D:S.244, D:D.292, D:D.292, D:F.338 Water bridges: D:T.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burgess, S.J. et al., Identification of the Elusive Pyruvate Reductase of Chlamydomonas reinhardtii Chloroplasts. Plant Cell.Physiol. (2016)

Release Date

2015-12-02

Peptides

Putative D-lactate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Putative D-lactate dehydrogenase

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