SMTL ID : 4zgs.2 (1 other biounit)

Identification of the pyruvate reductase of Chlamydomonas reinhardtii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 23 residues within 4Å: Chain A: Y.134, T.186, G.187, A.188, I.189, Y.207, D.208, I.209, H.238, C.239, P.240, L.242, S.244, T.245, V.266, S.267, R.268, D.292, V.293, H.335, T.336, A.337, F.338 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.134 Hydrogen bonds: A:G.187, A:A.188, A:I.189, A:C.239, A:S.244, A:D.292, A:D.292, A:F.338 Water bridges: A:G.187, A:G.187 NAD.2: 26 residues within 4Å: Chain B: Y.134, V.184, G.185, T.186, G.187, A.188, I.189, Y.207, D.208, I.209, K.210, H.238, C.239, P.240, L.242, S.244, T.245, V.266, S.267, R.268, D.292, V.293, H.335, T.336, A.337, F.338 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:Y.134 Hydrogen bonds: B:G.187, B:A.188, B:I.189, B:C.239, B:S.244, B:S.244, B:D.292, B:F.338 Water bridges: B:G.187, B:G.190, B:R.268 NAD.3: 26 residues within 4Å: Chain C: A.111, Y.134, V.184, G.185, T.186, G.187, A.188, I.189, Y.207, D.208, I.209, H.238, C.239, P.240, L.241, L.242, S.244, T.245, V.266, S.267, R.268, D.292, H.335, T.336, A.337, F.338 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:Y.134 Hydrogen bonds: C:G.187, C:G.187, C:A.188, C:I.189, C:C.239, C:L.241, C:S.244, C:S.244, C:D.292, C:A.337, C:F.338 Water bridges: C:G.190, C:G.190 NAD.4: 23 residues within 4Å: Chain D: Y.134, V.184, T.186, G.187, A.188, I.189, Y.207, D.208, I.209, H.238, C.239, P.240, L.242, S.244, T.245, V.266, S.267, R.268, D.292, H.335, T.336, A.337, F.338 9 PLIP interactions: 9 interactions with chain D Hydrophobic interactions: D:Y.134 Hydrogen bonds: D:G.187, D:A.188, D:I.189, D:G.190, D:S.244, D:D.292, D:D.292, D:F.338

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burgess, S.J. et al., Identification of the Elusive Pyruvate Reductase of Chlamydomonas reinhardtii Chloroplasts. Plant Cell.Physiol. (2016)

Release Date

2015-12-02

Peptides

Putative D-lactate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

Putative D-lactate dehydrogenase

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