SMTL ID : 4zh5.2 (1 other biounit)

Crystal structure of Endoglucanase from Perinereis brevicirris with Cellobiose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC.1: 4 residues within 4Å: Chain A: D.391, D.392, Q.393, N.395 No protein-ligand interaction detected (PLIP)

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: A.208, D.211, E.212, D.248 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:A.208, A:D.211, A:E.212, H2O.5, H2O.10

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: L.318, T.319, S.320, Q.321 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: A.37, D.39, D.40, R.135 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.39, A:R.135 Water bridges: A:A.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fewings, R.S., Biophysical and structural characterisation of the endoglucanase from Perinereis brevicirris. To Be Published

Release Date

2016-06-29

Peptides

Endoglucanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Endoglucanase

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