SMTL ID : 4zpm.2 (1 other biounit)

Crystal Structure of Protocadherin Alpha C2 EC1-3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x MAN: alpha-D-mannopyranose(Post Translational Modification)

MAN.1: 3 residues within 4Å: Chain A: A.194, R.195, S.196 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.194 MAN.2: 4 residues within 4Å: Chain A: V.184, T.198, A.199, Q.200 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.200

6 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: N.209, N.211, D.241, D.243, N.247, D.297 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.211, A:D.241, A:D.243, A:N.247, A:D.297 CA.4: 7 residues within 4Å: Chain A: E.117, E.176, D.207, T.208, D.210, N.211, D.243 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.117, A:D.207, A:T.208, A:D.210, A:D.243 CA.5: 5 residues within 4Å: Chain A: E.117, D.174, E.176, D.210, N.211 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.117, A:D.174, A:E.176, A:D.210 CA.6: 6 residues within 4Å: Chain A: N.100, N.102, D.132, D.134, N.138, D.189 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.102, A:D.132, A:D.132, A:D.134, A:N.138 CA.7: 8 residues within 4Å: Chain A: E.8, E.66, D.98, I.99, D.101, N.102, D.134 Ligands: CA.8 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.8, A:E.66, A:I.99, A:D.101, A:D.134 CA.8: 6 residues within 4Å: Chain A: E.8, E.9, D.64, E.66, D.101 Ligands: CA.7 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.8, A:E.9, A:D.64, A:E.66, A:D.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rubinstein, R. et al., Molecular Logic of Neuronal Self-Recognition through Protocadherin Domain Interactions. Cell (2015)

Release Date

2015-10-28

Peptides

Protein Pcdhac2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein Pcdhac2

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