SMTL ID : 5a01.3 (2 other biounits)

O-GlcNAc transferase from Drososphila melanogaster

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.66 Å

Oligo State

monomer

Ligands

1 x 12V: (2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate(Non-covalent)

12V.1: 23 residues within 4Å: Chain A: H.188, P.248, T.249, H.251, L.252, L.342, G.343, P.345, F.383, Q.520, Y.522, M.523, L.547, V.576, A.577, A.578, K.579, H.582, R.585, C.598, H.601, T.602, D.606 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:P.345, A:L.547 Hydrogen bonds: A:T.249, A:H.251, A:L.342, A:A.577, A:A.577, A:K.579, A:K.579, A:H.582, A:H.582, A:H.601, A:H.601, A:T.602 pi-Stacking: A:H.582

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mariappa, D. et al., Dual functionality of O-GlcNAc transferase is required for Drosophila development. Open Biol (2015)

Release Date

2016-04-27

Peptides

O-GLYCOSYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

O-GLYCOSYLTRANSFERASE

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