SMTL ID : 5a0d.2 (3 other biounits)

N-terminal thioester domain of surface protein from Clostridium perfringens, Cys138Ala mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: K.20 Ligands: EDO.3 No protein-ligand interaction detected (PLIP) EDO.2: 4 residues within 4Å: Chain A: D.26, F.27, R.28, D.29 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.28, A:D.29 Water bridges: A:D.26, A:R.28 EDO.3: 8 residues within 4Å: Chain A: T.16, L.17, L.18, D.19, F.57, K.58, G.59 Ligands: EDO.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.19, A:K.20, A:K.58, A:G.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Walden, M. et al., An internal thioester in a pathogen surface protein mediates covalent host binding. Elife (2015)

Release Date

2015-06-03

Peptides

SURFACE ANCHORED PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

SURFACE ANCHORED PROTEIN

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