SMTL ID : 5a39.1 (1 other biounit)

Structure of Rad14 in complex with cisplatin containing DNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.4, C.7, C.26, C.29 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.4, A:C.7, A:C.26, A:C.29 ZN.2: 4 residues within 4Å: Chain B: C.4, C.7, C.26, C.29 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.4, B:C.7, B:C.26, B:C.29

4 x CPT: CISPLATIN(Non-functional Binders)

CPT.3: 14 residues within 4Å: Chain C: C.7, G.8, G.9, T.10 Chain E: G.5 Chain F: C.7, C.8, G.9 Chain G: A.5 Chain H: C.6, C.7, G.8, T.9 Ligands: CPT.4 No protein-ligand interaction detected (PLIP) CPT.4: 11 residues within 4Å: Chain C: C.7, G.8 Chain F: G.5, A.6, C.7, C.8 Chain H: A.5, C.6, C.7, G.8 Ligands: CPT.3 No protein-ligand interaction detected (PLIP) CPT.5: 15 residues within 4Å: Chain C: A.6 Chain D: C.7, G.8, G.9, T.10 Chain E: C.7, C.8, G.9 Chain F: G.5 Chain G: C.6, C.7, G.8, T.9 Chain H: A.5 Ligands: CPT.6 No protein-ligand interaction detected (PLIP) CPT.6: 11 residues within 4Å: Chain D: C.7, G.8 Chain E: G.5, A.6, C.7, C.8 Chain G: A.5, C.6, C.7, G.8 Ligands: CPT.5 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koch, S.C. et al., Structural Insights Into the Recognition of Cisplatin and Aaf-Dg Lesion by Rad14 (Xpa). Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-06-24

Peptides

DNA REPAIR PROTEIN RAD14: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA REPAIR PROTEIN RAD14

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