SMTL ID : 5a86.1

Structure of pregnane X receptor in complex with a Sphingosine 1- Phosphate Receptor 1 Antagonist

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

hetero-2-2-mer

Ligands

2 x D7E: 4-chloro-N-[(1R)-1-[1-ethyl-6-(trifluoromethyl)benzimidazol-2-yl]ethyl]benzenesulfonamide(Non-covalent)

D7E.1: 13 residues within 4Å: Chain A: L.91, V.93, H.124, M.125, M.128, F.163, Q.167, F.170, W.181, Y.188, M.205, H.209, H.289 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.91, A:F.163 Hydrogen bonds: A:Q.167, A:Q.167 pi-Stacking: A:F.170, A:W.181, A:W.181 D7E.2: 13 residues within 4Å: Chain B: L.91, V.93, L.121, H.124, M.125, F.163, Q.167, F.170, W.181, Y.188, M.205, H.209, H.289 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:L.91, B:F.163 Hydrogen bonds: B:Q.167, B:Q.167 pi-Stacking: B:F.170, B:W.181, B:W.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hennessy, E.J. et al., Identification and Optimization of Benzimidazole Sulfonamides as Orally Bioavailable Sphingosine 1-Phosphate Receptor 1 Antagonists with in Vivo Activity. J.Med.Chem. (2015)

Release Date

2015-10-21

Peptides

NUCLEAR RECEPTOR SUBFAMILY 1 GROUP I MEMBER 2: AB
NUCLEAR RECEPTOR COACTIVATOR 1: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

NUCLEAR RECEPTOR SUBFAMILY 1 GROUP I MEMBER 2

NUCLEAR RECEPTOR COACTIVATOR 1