SMTL ID : 5a9y.1

Structure of ppGpp BipA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 4.00 Å

Oligo State

homo-dimer

Ligands

2 x G4P: GUANOSINE-5',3'-TETRAPHOSPHATE(Non-covalent)

G4P.1: 13 residues within 4Å: Chain A: H.16, G.17, K.18, T.19, T.20, K.50, N.128, K.129, D.131, R.132, S.166, A.167, L.168 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:K.18, A:T.19, A:T.19, A:T.19, A:T.20, A:T.20, A:N.128, A:K.129, A:K.129, A:R.132, A:A.167, A:L.168 Salt bridges: A:H.16, A:H.16, A:D.131 pi-Cation interactions: A:K.129 G4P.2: 13 residues within 4Å: Chain B: H.16, G.17, K.18, T.19, T.20, K.50, N.128, K.129, D.131, R.132, S.166, A.167, L.168 16 PLIP interactions: 16 interactions with chain B Hydrogen bonds: B:K.18, B:T.19, B:T.19, B:T.19, B:T.20, B:T.20, B:N.128, B:K.129, B:K.129, B:R.132, B:A.167, B:L.168 Salt bridges: B:H.16, B:H.16, B:D.131 pi-Cation interactions: B:K.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, V. et al., Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-08-26

Peptides

GTP-BINDING PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

GTP-BINDING PROTEIN

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