SMTL ID : 5agd.1 (1 other biounit)

An inactive (D125N) variant of the catalytic domain, BcGH76, of Bacillus circulans Aman6 in complex with alpha-1,6-mannopentaose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x BMA- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose

BMA-MAN-MAN-MAN-MAN.1: 18 residues within 4Å: Chain A: D.58, W.60, F.109, D.111, N.112, W.115, W.159, N.168, C.170, D.215, R.216, D.226, T.228, Y.230, E.276, D.281, L.282 Ligands: MAN.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.58, A:N.112, A:D.281, A:E.276 Water bridges: A:F.59, A:D.281, A:D.226, A:D.226, A:N.274

1 x MAN: alpha-D-mannopyranose(Non-covalent)

MAN.2: 7 residues within 4Å: Chain A: D.58, W.60, F.109, N.112, D.281 Ligands: BMA-MAN-MAN-MAN-MAN.1, BMA-MAN-MAN-MAN-MAN.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.58, A:N.112, A:D.281 Water bridges: A:W.60, A:D.281

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thompson, A.J. et al., Evidence for a Boat Conformation at the Transition State of Gh76 Alpha-1,6-Mannanases- Key Enzymes in Bacterial and Fungal Mannoprotein Metabolism. Angew.Chem.Int.Ed.Engl. (2015)

Release Date

2015-03-25

Peptides

ALPHA-1,6-MANNANASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ALPHA-1,6-MANNANASE

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