SMTL ID : 5aox.2 (1 other biounit)

Human Alu RNA retrotransposition complex in the ribosome-stalling conformation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: V.27 Chain B: Y.26, T.28, T.60 Chain C: U.24, G.25 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:T.60 Hydrogen bonds: B:T.28, B:T.28

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain C: C.3, C.4 No protein-ligand interaction detected (PLIP)

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.3: 2 residues within 4Å: Chain C: G.5, C.77 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ahl, V. et al., Retrotransposition and Crystal Structure of an Alu Rnp in the Ribosome-Stalling Conformation. Mol.Cell (2015)

Release Date

2015-11-11

Peptides

SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN: A
SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN

SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN

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