SMTL ID : 5awq.1

Arthrobacter globiformis T6 isomalto-dextranse complexed with panose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x GLC- GLC- GLC: alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose

GLC-GLC-GLC.1: 16 residues within 4Å: Chain A: Y.44, D.81, G.82, W.83, I.84, E.85, Y.124, F.160, D.201, F.202, D.211, N.213, M.247, R.265, D.269, W.289 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.83, A:W.83, A:I.84, A:E.85 Water bridges: A:W.83, A:E.85

1 x GLC- GLC: alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.2: 6 residues within 4Å: Chain A: H.493, D.503, Q.506, W.570, A.600, N.602 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:H.493, A:N.602, A:N.602 Water bridges: A:N.492, A:N.492, A:D.503, A:G.504, A:G.504

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 4 residues within 4Å: Chain A: T.421, D.423, K.426, R.450 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.423 Water bridges: A:D.423 Salt bridges: A:K.426, A:R.450

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okazawa, Y. et al., Crystal Structure and Mutational Analysis of Isomalto-dextranase, a Member of Glycoside Hydrolase Family 27. J.Biol.Chem. (2015)

Release Date

2015-09-09

Peptides

Isomaltodextranase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isomaltodextranase

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