- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.09 Å
- Oligo State
- hetero-6-6-mer
- Ligands
- 24 x CYC: PHYCOCYANOBILIN(Covalent)
- 6 x PUB: PHYCOUROBILIN(Covalent)
PUB.5: 15 residues within 4Å:- Chain B: C.50, D.54, S.57, G.58, C.61, E.62, I.133, A.136, S.137, A.140, F.141, T.145, A.146, S.147, D.148
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:I.133, B:I.133, B:A.136, B:A.140, B:F.141, B:F.141, B:A.146
- Hydrogen bonds: B:S.147, B:D.148, B:R.149
- Water bridges: B:D.54
PUB.18: 17 residues within 4Å:- Chain H: C.50, D.54, S.57, G.58, C.61, E.62, R.129, I.133, A.136, S.137, A.140, F.141, T.145, A.146, S.147, D.148, R.149
14 PLIP interactions:14 interactions with chain H- Hydrophobic interactions: H:I.133, H:I.133, H:A.136, H:A.140, H:F.141, H:A.146
- Hydrogen bonds: H:S.147, H:D.148, H:D.148
- Water bridges: H:R.129, H:R.129, H:S.147, H:S.147
- Salt bridges: H:R.129
PUB.21: 16 residues within 4Å:- Chain I: C.50, D.54, S.57, G.58, C.61, E.62, R.129, I.133, A.136, S.137, F.141, T.145, A.146, S.147, D.148, R.149
10 PLIP interactions:10 interactions with chain I- Hydrophobic interactions: I:I.133, I:I.133, I:A.136, I:F.141, I:A.146
- Hydrogen bonds: I:S.147, I:D.148, I:R.149
- Water bridges: I:A.136
- Salt bridges: I:R.129
PUB.24: 17 residues within 4Å:- Chain J: C.50, D.54, S.57, G.58, C.61, E.62, R.129, I.133, A.136, S.137, A.140, F.141, T.145, A.146, S.147, D.148, R.149
11 PLIP interactions:11 interactions with chain J- Hydrophobic interactions: J:I.133, J:A.140, J:F.141, J:F.141, J:A.146
- Hydrogen bonds: J:T.145, J:S.147, J:D.148, J:R.149
- Water bridges: J:D.54
- Salt bridges: J:R.129
PUB.27: 16 residues within 4Å:- Chain K: C.50, D.54, S.57, G.58, C.61, E.62, R.129, I.133, A.136, S.137, F.141, T.145, A.146, S.147, D.148, R.149
11 PLIP interactions:11 interactions with chain K- Hydrophobic interactions: K:I.133, K:I.133, K:A.136, K:F.141, K:A.146
- Hydrogen bonds: K:S.147, K:S.147, K:D.148, K:R.149
- Water bridges: K:T.145
- Salt bridges: K:R.129
PUB.30: 16 residues within 4Å:- Chain L: C.50, D.54, S.57, G.58, C.61, E.62, R.129, I.133, A.136, S.137, F.141, T.145, A.146, S.147, D.148, R.149
12 PLIP interactions:12 interactions with chain L- Hydrophobic interactions: L:I.133, L:I.133, L:A.136, L:F.141, L:A.146
- Hydrogen bonds: L:S.147, L:S.147, L:D.148, L:R.149
- Water bridges: L:S.147, L:S.147
- Salt bridges: L:R.129
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miyabe, Y. et al., Structural properties of phycoerythrin from dulse palmaria palmata. J FOOD BIOCHEM. (2016)
- Release Date
- 2016-10-05
- Peptides
- Phycoerythrin alpha subunit: ACDEFG
Phycoerythrin beta subunit: BHIJKL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
BD
CE
DF
EG
FB
GH
HI
IJ
JK
KL
L
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.09 Å
- Oligo State
- hetero-6-6-mer
- Ligands
- 24 x CYC: PHYCOCYANOBILIN(Covalent)
- 6 x PUB: PHYCOUROBILIN(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miyabe, Y. et al., Structural properties of phycoerythrin from dulse palmaria palmata. J FOOD BIOCHEM. (2016)
- Release Date
- 2016-10-05
- Peptides
- Phycoerythrin alpha subunit: ACDEFG
Phycoerythrin beta subunit: BHIJKL - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
BD
CE
DF
EG
FB
GH
HI
IJ
JK
KL
L