SMTL ID : 5brd.1

Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor BENZ-GlcN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x BG8: 2-(benzoylamino)-2-deoxy-beta-D-glucopyranose(Non-covalent)

BG8.1: 15 residues within 4Å: Chain A: P.106, G.107, P.108, P.117, N.119, N.144, D.145, G.200, L.201, G.202, E.221, S.224, E.250 Chain B: M.309, F.353 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:P.108, A:P.117, B:F.353 Hydrogen bonds: A:N.119, A:N.119, A:N.144, A:N.144, A:E.221, A:E.221 Water bridges: A:G.200, A:L.201 BG8.2: 16 residues within 4Å: Chain A: M.309, F.353 Chain B: P.106, G.107, P.108, P.117, N.119, N.144, D.145, L.146, G.200, L.201, G.202, E.221, S.224, E.250 9 PLIP interactions: 8 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:P.108, A:F.353 Hydrogen bonds: B:N.119, B:N.119, B:N.144, B:N.144, B:E.221, B:E.221 Water bridges: B:S.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

D'Antonio, E.L. et al., Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase. Mol.Biochem.Parasitol. (2016)

Release Date

2015-06-17

Peptides

Glucokinase 1, putative: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucokinase 1, putative

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