SMTL ID : 5brf.1

Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor HPOP-GlcN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x 4V5: 2-deoxy-2-{[3-(4-hydroxyphenyl)propanoyl]amino}-alpha-D-glucopyranose(Non-covalent)

4V5.1: 17 residues within 4Å: Chain A: P.106, G.107, P.108, P.117, F.118, N.119, N.144, D.145, G.200, L.201, G.202, E.221, S.224, E.250 Chain B: M.348, F.351, F.353 16 PLIP interactions: 14 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:P.117, A:N.119, B:F.353 Hydrogen bonds: A:N.119, A:N.144, A:N.144, A:E.221, A:E.221, A:E.221 Water bridges: A:D.145, A:G.200, A:G.200, A:G.200, A:G.202, A:G.223 pi-Stacking: B:F.351 4V5.2: 13 residues within 4Å: Chain A: M.348, F.351, F.353 Chain B: G.107, P.108, N.119, N.144, D.145, L.201, G.202, E.221, S.224, E.250 11 PLIP interactions: 9 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:N.119, A:F.353 Hydrogen bonds: B:N.144, B:N.144, B:E.221, B:E.221 Water bridges: B:N.119, B:L.201, B:E.221, B:S.224 pi-Stacking: A:F.351

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

D'Antonio, E.L. et al., Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase. Mol.Biochem.Parasitol. (2016)

Release Date

2015-06-17

Peptides

Glucokinase 1, putative: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucokinase 1, putative

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