- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 2 x 4W9: (4S,4aS,6aS,8R,9R,10aR,13R,14aS,18aR,18bR)-9-ethyl-4,8,19-trihydroxy-10a,12,13,18a-tetramethyl-2,3,4,4a,5,6,6a,7,8,9,10,10a,13,14,18a,18b-hexadecahydro-1H-14a,17-(metheno)benzo[b]naphtho[2,1-h]azacyclododecine-16,18(15H,17H)-dione(Non-covalent)
4W9.5: 26 residues within 4Å:- Chain A: D.7, R.9, A.10, A.13, E.65, F.66, A.67, L.70, V.72, T.81, V.83, Y.85, E.87, A.104, V.106, M.113, Q.115, H.117, I.134, C.136, M.139, L.140, L.165, Y.177
- Ligands: GOL.2, GOL.3
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:R.9, A:A.10, A:E.65, A:A.67, A:L.70, A:V.72, A:V.83, A:I.134, A:Y.177, A:Y.177, A:Y.177
- Hydrogen bonds: A:R.9, A:Q.115, A:H.117, A:Y.177
- Water bridges: A:R.9, A:Y.177
4W9.8: 25 residues within 4Å:- Chain B: R.9, A.10, A.13, E.65, F.66, A.67, L.70, V.72, T.81, V.83, Y.85, E.87, A.104, V.106, M.109, M.113, Q.115, H.117, I.134, C.136, M.139, L.140, L.165, Y.177
- Ligands: GOL.6
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:E.65, B:A.67, B:L.70, B:V.83, B:I.134, B:Y.177
- Hydrogen bonds: B:Q.115, B:H.117, B:Y.177
- Water bridges: B:R.9
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zheng, Q. et al., Enzyme-Dependent [4 + 2] Cycloaddition Depends on Lid-like Interaction of the N-Terminal Sequence with the Catalytic Core in PyrI4. Cell Chem Biol (2016)
- Release Date
- 2016-02-24
- Peptides
- PyrI4: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 2 x 4W9: (4S,4aS,6aS,8R,9R,10aR,13R,14aS,18aR,18bR)-9-ethyl-4,8,19-trihydroxy-10a,12,13,18a-tetramethyl-2,3,4,4a,5,6,6a,7,8,9,10,10a,13,14,18a,18b-hexadecahydro-1H-14a,17-(metheno)benzo[b]naphtho[2,1-h]azacyclododecine-16,18(15H,17H)-dione(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zheng, Q. et al., Enzyme-Dependent [4 + 2] Cycloaddition Depends on Lid-like Interaction of the N-Terminal Sequence with the Catalytic Core in PyrI4. Cell Chem Biol (2016)
- Release Date
- 2016-02-24
- Peptides
- PyrI4: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D