SMTL ID : 5bun.1

Crystal structure of an antigenic outer membrane protein ST50 from Salmonella Typhi

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.98 Å

Oligo State

homo-trimer

Ligands

4 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 13 residues within 4Å: Chain A: T.365, V.367, D.368, D.371 Chain B: T.365, V.367, D.368, D.371 Chain C: R.364, T.365, V.367, D.368, D.371 5 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B, 2 interactions with chain C Hydrogen bonds: A:T.365, A:D.368, B:D.368, C:R.364, C:T.365 BOG.2: 4 residues within 4Å: Chain A: Q.241, H.244, N.296, Q.303 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.241, A:N.296 BOG.3: 2 residues within 4Å: Chain B: H.244, N.296 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:H.244, B:N.296 Salt bridges: B:H.244 BOG.4: 1 residues within 4Å: Chain C: H.244 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guan, H.H. et al., Crystal structure of an antigenic outer-membrane protein from Salmonella Typhi suggests a potential antigenic loop and an efflux mechanism. Sci Rep (2015)

Release Date

2015-12-23

Peptides

Outer membrane protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Outer membrane protein