SMTL ID : 5bxo.2 (1 other biounit)

Human Tankyrase-2 in Complex with Macrocyclised Extended Peptide cp4n2m3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: G.118, K.119, Y.120, E.121 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.120, A:E.121 Water bridges: A:E.121, A:E.121, A:I.122 Salt bridges: A:K.119 SO4.2: 2 residues within 4Å: Chain A: Q.128, H.129 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.128 Salt bridges: A:K.95, A:H.129 SO4.3: 4 residues within 4Å: Chain A: N.52, R.53, V.54, S.55 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.54, A:S.55 Water bridges: A:R.53, A:V.56

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 3 residues within 4Å: Chain A: Y.120, K.124, L.157 No protein-ligand interaction detected (PLIP) DMS.5: 2 residues within 4Å: Chain A: E.58, L.92 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:E.58

1 x 4XP: 4,4'-propane-1,3-diylbis(1-methyl-1H-1,2,3-triazole)(Covalent)

4XP.6: 6 residues within 4Å: Chain A: Y.84 Chain B: A.4, G.7, A.8, E.9, X.10 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Y.84 Water bridges: B:E.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, W. et al., Macrocyclized Extended Peptides: Inhibiting the Substrate-Recognition Domain of Tankyrase. J.Am.Chem.Soc. (2017)

Release Date

2016-06-29

Peptides

Tankyrase-2: A
Tankyrase-2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Tankyrase-2

Tankyrase-2

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