SMTL ID : 5bz4.2 (2 other biounits)

Crystal structure of a T1-like thiolase (CoA-complex) from Mycobacterium smegmatis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

homo-tetramer

Ligands

2 x COA: COENZYME A(Non-covalent)

COA.1: 15 residues within 4Å: Chain B: C.90, R.149, M.163, H.189, T.229, L.234, L.237, A.252, S.256, G.257, Q.258, A.327, F.328, H.360 Chain C: R.136 9 PLIP interactions: 7 interactions with chain B, 2 interactions with chain C Hydrophobic interactions: B:A.252, B:Q.258 Hydrogen bonds: B:T.229, B:S.256, B:S.256 Water bridges: B:Q.258, B:Q.258 Salt bridges: C:R.136, C:R.136 COA.2: 16 residues within 4Å: Chain A: R.136 Chain D: C.90, R.149, M.163, L.164, H.189, T.229, L.234, L.237, A.252, G.253, S.256, Q.258, A.327, F.328, H.360 7 PLIP interactions: 6 interactions with chain D, 1 interactions with chain A Hydrophobic interactions: D:A.252, D:Q.258 Hydrogen bonds: D:T.229, D:T.229, D:S.256, D:S.256 Salt bridges: A:R.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Janardan, N. et al., Structural characterization of a mitochondrial 3-ketoacyl-CoA (T1)-like thiolase from Mycobacterium smegmatis. Acta Crystallogr.,Sect.D (2015)

Release Date

2016-05-18

Peptides

Beta-ketothiolase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

Beta-ketothiolase

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